Package org.openscience.cdk.renderer.generators

Interface Summary

Interface	Description
HighlightGenerator.Palette	Defines a color palette, the palette should provide a color the specified identifier (id).
IGenerator<T extends IChemObject>	An IGenerator converts chemical entities into parts of the chemical drawing expressed as IRenderingElements.
IGeneratorParameter<T>	Parameter from some rendering of the 2D diagram.

Class Summary

Class	Description
AtomContainerBoundsGenerator	IGenerator that draws a rectangular around the IAtomContainer.
AtomMassGenerator	IGenerator that can render mass number information of atoms.
AtomNumberGenerator	IGenerator for IAtomContainers that will draw atom numbers for the atoms.
AtomNumberGenerator.AtomColorer	The color scheme by which to color the atom numbers, if the AtomNumberGenerator.ColorByType boolean is true.
AtomNumberGenerator.AtomNumberTextColor	Color to draw the atom numbers with.
AtomNumberGenerator.ColorByType	Boolean to indicate of the AtomNumberGenerator.AtomColorer scheme will be used.
AtomNumberGenerator.Offset	Offset vector in screen space coordinates where the atom number label will be placed.
AtomNumberGenerator.WillDrawAtomNumbers	Boolean parameter indicating if atom numbers should be drawn, allowing this feature to be disabled temporarily.
BasicAtomGenerator	Generates basic IRenderingElements for atoms in an atom container.
BasicAtomGenerator.AtomColor	Class to hold the color by which atom labels are drawn.
BasicAtomGenerator.AtomColorer	IAtomColorer used to draw elements.
BasicAtomGenerator.AtomRadius	Magic number with unknown units that defines the radius around an atom, e.g.
BasicAtomGenerator.ColorByType	Boolean property that triggers atoms to be colored by type when set to true.
BasicAtomGenerator.CompactAtom	Boolean parameters that will cause atoms to be drawn as filled shapes when set to true.
BasicAtomGenerator.CompactShape	Shape to be used when drawing atoms in compact mode, as defined by the BasicAtomGenerator.CompactAtom parameter.
BasicAtomGenerator.KekuleStructure	Determines whether structures should be drawn as Kekule structures, thus giving each carbon element explicitly, instead of not displaying the element symbol.
BasicAtomGenerator.ShowEndCarbons	Boolean parameters that will show carbons with only one (non-hydrogen) neighbor to be drawn with an element symbol.
BasicAtomGenerator.ShowExplicitHydrogens	Boolean property that triggers explicit hydrogens to be drawn if set to true.
BasicBondGenerator	Generator for elements from bonds.
BasicBondGenerator.BondDistance	The gap between double and triple bond lines on the screen.
BasicBondGenerator.BondWidth	The width on screen of a bond.
BasicBondGenerator.DefaultBondColor	The color to draw bonds if not other color is given.
BasicBondGenerator.TowardsRingCenterProportion	The proportion to move in towards the ring center.
BasicBondGenerator.WedgeWidth	The width on screen of the fat end of a wedge bond.
BasicGenerator	Combination generator for basic drawing of molecules.
BasicSceneGenerator	This generator does not create any elements, but acts as a holding place for various generator parameters used by most drawings, such as the zoom, background color, margin, etc.
BasicSceneGenerator.ArrowHeadWidth	The width of the head of arrows.
BasicSceneGenerator.BackgroundColor	The background color of the drawn image.
BasicSceneGenerator.BondLength	The length on the screen of a typical bond.
BasicSceneGenerator.FitToScreen	If true, the scale is set such that the diagram fills the whole screen.
BasicSceneGenerator.FontName	Font to use for text.
BasicSceneGenerator.ForegroundColor	The foreground color, with which objects are drawn.
BasicSceneGenerator.Margin	Area on each of the four margins to keep empty.
BasicSceneGenerator.Scale	The scale is the factor to multiply model coordinates by to convert the coordinates to screen space coordinate, such that the entire structure fits the visible screen dimension.
BasicSceneGenerator.ShowMoleculeTitle	Determines if the molecule's title is depicted.
BasicSceneGenerator.ShowReactionTitle	Determines if the reaction's title is depicted.
BasicSceneGenerator.ShowTooltip	Determines if tooltips are to be shown.
BasicSceneGenerator.UseAntiAliasing	If set to true, uses anti-aliasing for drawing.
BasicSceneGenerator.UsedFontStyle	The font style to use for text.
BasicSceneGenerator.ZoomFactor	The zoom factor which is a user oriented parameter allowing the user to zoom in on parts of the molecule.
BoundsGenerator	Produce a bounding rectangle for various chem objects.
BoundsGenerator.BoundsColor	The color of the box drawn at the bounds of a molecule, molecule set, or reaction.
ExtendedAtomGenerator	A generator for atoms with mass, charge, etc.
ExtendedAtomGenerator.ShowAtomTypeNames	Boolean that indicates if atom type names should be given instead of element symbols.
ExtendedAtomGenerator.ShowImplicitHydrogens	Boolean that indicates if implicit hydrogens should be depicted.
HighlightGenerator	Generate an under/overlaid highlight in structure depictions.
HighlightGenerator.HighlightPalette	Defines the color palette used to provide the highlight colors.
HighlightGenerator.HighlightRadius	Magic number with unknown units that defines the radius around an atom, e.g.
LonePairGenerator	Generate the symbols for lone pairs.
MappingGenerator	IGenerator that will show how atoms map between the reactant and product side.
MappingGenerator.AtomAtomMappingLineColor	The width on screen of an atom-atom mapping line.
MappingGenerator.MappingLineWidth	The width on screen of an atom-atom mapping line.
MappingGenerator.ShowAtomAtomMapping	Boolean by which atom-atom mapping depiction can be temporarily disabled.
ProductsBoxGenerator	Generate the symbols for radicals.
RadicalGenerator	Generate the symbols for radicals.
ReactantsBoxGenerator	Generate the symbols for radicals.
ReactionArrowGenerator	Generate the arrow for a reaction.
ReactionBoxGenerator	Generate the symbols for radicals.
ReactionPlusGenerator	Generate the arrow for a reaction.
ReactionSceneGenerator	Generator for general reaction scene components.
ReactionSceneGenerator.ArrowHeadWidth	Double which indicates how wide the arrow head is in screen pixels.
ReactionSceneGenerator.ShowReactionBoxes	Boolean that indicates if boxes are drawn around the reaction.
RingGenerator	Generates just the aromatic indicators for rings : circles, or light-gray inner bonds, depending on the value of CDKStyleAromaticity.
RingGenerator.CDKStyleAromaticity	Depicts aromaticity of rings in the original CDK style.
RingGenerator.MaxDrawableAromaticRing	The maximum ring size for which an aromatic ring should be drawn.
RingGenerator.RingProportion	The proportion of a ring bounds to use to draw the ring.
RingGenerator.ShowAromaticity	Determines whether rings should be drawn with a circle if they are aromatic.

Enum Summary

Enum	Description
BasicAtomGenerator.Shape	When atoms are selected or in compact mode, they will be covered by a shape determined by this enumeration.