protected boolean |
BasicAtomGenerator.canDraw(IAtom atom,
IAtomContainer container,
RendererModel model) |
Checks an atom to see if it should be drawn.
|
IRenderingElement |
AtomContainerBoundsGenerator.generate(IAtomContainer container,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
AtomNumberGenerator.generate(IAtomContainer container,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
BasicAtomGenerator.generate(IAtomContainer atomContainer,
IAtom atom,
RendererModel model) |
Generate the rendering element(s) for a particular atom.
|
IRenderingElement |
BasicAtomGenerator.generate(IAtomContainer container,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
BasicBondGenerator.generate(IAtomContainer container,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
BasicBondGenerator.generate(IBond currentBond,
RendererModel model) |
Generate rendering element(s) for the current bond, including ring
elements if this bond is part of a ring.
|
IRenderingElement |
BasicGenerator.generate(IAtomContainer ac,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
BasicSceneGenerator.generate(IAtomContainer ac,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
BoundsGenerator.generate(IReaction reaction,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
ExtendedAtomGenerator.generate(IAtomContainer container,
IAtom atom,
RendererModel model) |
Generate the rendering element(s) for a particular atom.
|
IRenderingElement |
HighlightGenerator.generate(IAtomContainer container,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
IGenerator.generate(T object,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
LonePairGenerator.generate(IAtomContainer container,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
MappingGenerator.generate(IReaction reaction,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
ProductsBoxGenerator.generate(IReaction reaction,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
RadicalGenerator.generate(IAtomContainer container,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
ReactantsBoxGenerator.generate(IReaction reaction,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
ReactionArrowGenerator.generate(IReaction reaction,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
ReactionBoxGenerator.generate(IReaction reaction,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
ReactionPlusGenerator.generate(IReaction reaction,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
ReactionSceneGenerator.generate(IReaction reaction,
RendererModel model) |
Converts a IChemObject from the chemical data model into
something that can be drawn in the chemical drawing.
|
IRenderingElement |
BasicBondGenerator.generateBond(IBond bond,
RendererModel model) |
Generate stereo or bond elements for this bond.
|
IRenderingElement |
BasicBondGenerator.generateBondElement(IBond bond,
IBond.Order type,
RendererModel model) |
Generate a LineElement or an ElementGroup of LineElements for this bond.
|
IRenderingElement |
BasicBondGenerator.generateBondElement(IBond bond,
RendererModel model) |
Generate rendering elements for a bond, without ring elements but
considering the type of the bond (single, double, triple).
|
IRenderingElement |
BasicAtomGenerator.generateCompactElement(IAtom atom,
RendererModel model) |
Generate a compact element for an atom, such as a circle or a square,
rather than text element.
|
AtomSymbolElement |
BasicAtomGenerator.generateElement(IAtom atom,
int alignment,
RendererModel model) |
Generate an atom symbol element.
|
LineElement |
BasicBondGenerator.generateInnerElement(IBond bond,
IRing ring,
RendererModel model) |
Make the inner ring bond, which is slightly shorter than the outer bond.
|
IRenderingElement |
BasicBondGenerator.generateRingElements(IBond bond,
IRing ring,
RendererModel model) |
Generate ring elements, such as inner-ring bonds or ring stereo elements.
|
IRenderingElement |
RingGenerator.generateRingElements(IBond bond,
IRing ring,
RendererModel model) |
Generate ring elements, such as inner-ring bonds or ring stereo elements.
|
protected Color |
BasicAtomGenerator.getAtomColor(IAtom atom,
RendererModel model) |
Returns the drawing color of the given atom.
|
Color |
BasicBondGenerator.getColorForBond(IBond bond,
RendererModel model) |
Determine the color of a bond, returning either the default color,
the override color or whatever is in the color hash for that bond.
|
double |
BasicBondGenerator.getWidthForBond(IBond bond,
RendererModel model) |
Determine the width of a bond, returning either the width defined
in the model, or the override width.
|
protected boolean |
BasicAtomGenerator.invisibleCarbon(IAtom atom,
IAtomContainer atomContainer,
RendererModel model) |
Checks an atom to see if it is an 'invisible carbon' - that is, it is:
a) a carbon atom and b) this carbon should not be shown.
|
protected boolean |
BasicAtomGenerator.invisibleHydrogen(IAtom atom,
RendererModel model) |
Checks an atom to see if it is an 'invisible hydrogen' - that is, it
is a) an (explicit) hydrogen, and b) explicit hydrogens are set to off.
|
boolean |
AtomMassGenerator.showCarbon(IAtom atom,
IAtomContainer container,
RendererModel model) |
Returns true if the mass number of this element is set and not
equal the mass number of the most abundant isotope of this element.
|
protected boolean |
BasicAtomGenerator.showCarbon(IAtom carbonAtom,
IAtomContainer container,
RendererModel model) |
Checks a carbon atom to see if it should be shown.
|