Package org.openscience.cdk.io.rdf
Class CDKOWLReader
java.lang.Object
org.openscience.cdk.io.ChemObjectIO
org.openscience.cdk.io.DefaultChemObjectReader
org.openscience.cdk.io.rdf.CDKOWLReader
- All Implemented Interfaces:
Closeable
,AutoCloseable
,IChemObjectIO
,IChemObjectReader
,ISimpleChemObjectReader
Reads content from a CDK OWL serialization.
- Source code:
- main
- Belongs to CDK module:
- iordf
- Keywords:
- file format, OWL
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Nested Class Summary
Nested classes/interfaces inherited from interface org.openscience.cdk.io.IChemObjectReader
IChemObjectReader.Mode
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Field Summary
Fields inherited from class org.openscience.cdk.io.DefaultChemObjectReader
errorHandler, mode
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Constructor Summary
ConstructorsConstructorDescriptionCreates a new CDKOWLReader with an undefined input.CDKOWLReader
(Reader input) Creates a new CDKOWLReader sending output to the given Writer. -
Method Summary
Modifier and TypeMethodDescriptionboolean
accepts
(Class<? extends IChemObject> classObject) Returns whether the givenIChemObject
can be read or written.void
close()
Closes this IChemObjectIO's resources.Returns theIResourceFormat
for this reader.<T extends IChemObject>
Tread
(T object) Reads an IChemObject of type "object" from input.void
setReader
(InputStream input) Sets the InputStream from which this ChemObjectReader should read the contents.void
Deprecated.Methods inherited from class org.openscience.cdk.io.DefaultChemObjectReader
fireFrameRead, handleError, handleError, handleError, handleError, setErrorHandler, setReaderMode
Methods inherited from class org.openscience.cdk.io.ChemObjectIO
addChemObjectIOListener, addSetting, addSettings, fireIOSettingQuestion, getIOSettings, getListeners, getSetting, getSetting, getSettings, hasSetting, removeChemObjectIOListener
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
Methods inherited from interface org.openscience.cdk.io.IChemObjectIO
addChemObjectIOListener, addSetting, addSettings, getIOSettings, getListeners, getSetting, getSetting, getSettings, hasSetting, removeChemObjectIOListener
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Constructor Details
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CDKOWLReader
Creates a new CDKOWLReader sending output to the given Writer.- Parameters:
input
-Reader
from which is OWL input is taken.
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CDKOWLReader
public CDKOWLReader()Creates a new CDKOWLReader with an undefined input.
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Method Details
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getFormat
Returns theIResourceFormat
for this reader.- Returns:
- returns a
CDKOWLFormat
.
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setReader
Deprecated.This method must not be used; XML reading requires the use of anInputStream
. UsesetReader(InputStream)
instead.- Parameters:
reader
- reader to which should be written.- Throws:
CDKException
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setReader
Sets the InputStream from which this ChemObjectReader should read the contents.- Throws:
CDKException
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accepts
Returns whether the givenIChemObject
can be read or written.- Parameters:
classObject
-IChemObject
of which is tested if it can be handled.- Returns:
- true, if the
IChemObject
can be handled.
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read
Reads an IChemObject of type "object" from input. The constructor of the actual implementation may take a Reader as input to get a very flexible reader that can read from string, files, etc.- Parameters:
object
- the type of object to return- Returns:
- returns an object of that contains the content (or part) of the input content
- Throws:
CDKException
- it is thrown if the type of information is not available from the input
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close
Closes this IChemObjectIO's resources.- Throws:
IOException
- when the wrapper IO class cannot be closed.
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