Package org.openscience.cdk.interfaces
Interface IPDBStructure
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- All Superinterfaces:
Cloneable
,ICDKObject
- All Known Implementing Classes:
DebugPDBStructure
,PDBStructure
,PDBStructure
public interface IPDBStructure extends ICDKObject
Represents the idea of an chemical structure.- Author:
- Miguel Rojas <miguel.rojas@uni-koeln.de>
- Source code:
- main
- Belongs to CDK module:
- interfaces
- Keywords:
- pdbpolymer
- Created on:
- 2006-11-20
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description Character
getEndChainID()
get the ending Chain identifier of this structure.Character
getEndInsertionCode()
get the ending Code for insertion of residues of this structure.Integer
getEndSequenceNumber()
get the ending sequence number of this structure.Character
getStartChainID()
get start Chain identifier of this structure.Character
getStartInsertionCode()
get start Code for insertion of residues of this structure.Integer
getStartSequenceNumber()
get the start sequence number of this structure.String
getStructureType()
get Structure Type of this structure.void
setEndChainID(Character endChainID)
set the ending Chain identifier of this structure.void
setEndInsertionCode(Character endInsertionCode)
set the ending Code for insertion of residues of this structure.void
setEndSequenceNumber(Integer endSequenceNumber)
set the ending sequence number of this structure.void
setStartChainID(Character startChainID)
set the start Chain identifier of this structure.void
setStartInsertionCode(Character startInsertionCode)
set the start Chain identifier of this structure.void
setStartSequenceNumber(Integer startSequenceNumber)
set the start sequence number of this structure.void
setStructureType(String structureType)
set the Structure Type of this structure.-
Methods inherited from interface org.openscience.cdk.interfaces.ICDKObject
getBuilder
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Method Detail
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getEndChainID
Character getEndChainID()
get the ending Chain identifier of this structure.- Returns:
- the ending Chain identifier of this structure
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setEndChainID
void setEndChainID(Character endChainID)
set the ending Chain identifier of this structure.- Parameters:
endChainID
- the ending Chain identifier of this structure
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getEndInsertionCode
Character getEndInsertionCode()
get the ending Code for insertion of residues of this structure.- Returns:
- the ending Code for insertion of residues of this structure
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setEndInsertionCode
void setEndInsertionCode(Character endInsertionCode)
set the ending Code for insertion of residues of this structure.- Parameters:
endInsertionCode
- the ending Code for insertion of residues of this structure
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getEndSequenceNumber
Integer getEndSequenceNumber()
get the ending sequence number of this structure.- Returns:
- the ending sequence number of this structure
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setEndSequenceNumber
void setEndSequenceNumber(Integer endSequenceNumber)
set the ending sequence number of this structure.- Parameters:
endSequenceNumber
- the ending sequence number of this structure
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getStartChainID
Character getStartChainID()
get start Chain identifier of this structure.- Returns:
- the start Chain identifier of this structure
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setStartChainID
void setStartChainID(Character startChainID)
set the start Chain identifier of this structure.- Parameters:
startChainID
- the start Chain identifier of this structure
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getStartInsertionCode
Character getStartInsertionCode()
get start Code for insertion of residues of this structure.- Returns:
- the start Code for insertion of residues of this structure
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setStartInsertionCode
void setStartInsertionCode(Character startInsertionCode)
set the start Chain identifier of this structure.- Parameters:
startInsertionCode
- the start Chain identifier of this structure
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getStartSequenceNumber
Integer getStartSequenceNumber()
get the start sequence number of this structure.- Returns:
- the start sequence number of this structure
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setStartSequenceNumber
void setStartSequenceNumber(Integer startSequenceNumber)
set the start sequence number of this structure.- Parameters:
startSequenceNumber
- the start sequence number of this structure
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getStructureType
String getStructureType()
get Structure Type of this structure.- Returns:
- the Structure Type of this structure
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setStructureType
void setStructureType(String structureType)
set the Structure Type of this structure.- Parameters:
structureType
- the Structure Type of this structure
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