org.openscience.cdk.smsd.algorithm.rgraph

Class CDKRNode

java.lang.Object

org.openscience.cdk.smsd.algorithm.rgraph.CDKRNode

Deprecated.

This class is part of SMSD and either duplicates functionality elsewhere in the CDK or provides public access to internal implementation details. SMSD has been deprecated from the CDK with a newer, more recent version of SMSD is available at http://github.com/asad/smsd.

@Deprecated
public class CDKRNode
extends Object

Node of the resolution graphe (RGraph) An CDKRNode represents an association betwwen two edges of the source graphs G1 and G2 that are compared. Two edges may be associated if they have at least one common feature. The association is defined outside this class. The node keeps tracks of the ID of the mapped edges (in an CDKRMap), of its neighbours in the RGraph it belongs to and of the set of incompatible nodes (nodes that may not be along with this node in the same solution)

Author:

Stephane Werner from IXELIS mail@ixelis.net

Source code:

master

Belongs to CDK module:

smsd

Created on:

2002-07-17

Constructor Summary

Constructors

Constructor and Description
CDKRNode(int id1, int id2) Deprecated. Constructor for the RNode object

Method Summary

Modifier and Type	Method and Description
BitSet	getExtension() Deprecated. Gets the extension attribute of the RNode object
BitSet	getForbidden() Deprecated. Gets the forbidden attribute of the RNode object
CDKRMap	getrMap() Deprecated. Returns resolution Map
CDKRMap	getRMap() Deprecated. Gets the rMap attribute of the RNode object
void	setExtension(BitSet extension) Deprecated. Sets the extension attribute of the RNode object
void	setForbidden(BitSet forbidden) Deprecated. Sets the forbidden attribute of the RNode object
void	setrMap(CDKRMap rMap) Deprecated. Sets resolution map/graph
void	setRMap(CDKRMap rMap) Deprecated. Sets the rMap attribute of the RNode object
String	toString() Deprecated. Returns a string representation of the RNode

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

CDKRNode

public CDKRNode(int id1,
                int id2)

Deprecated.

Constructor for the RNode object

Parameters:

id1 - number of the bond in the graphe 1

id2 - number of the bond in the graphe 2

Method Detail

setRMap

public void setRMap(CDKRMap rMap)

Deprecated.

Sets the rMap attribute of the RNode object

Parameters:

rMap - The new rMap value

setExtension

public void setExtension(BitSet extension)

Deprecated.

Sets the extension attribute of the RNode object

Parameters:

extension - The new extension value

setForbidden

public void setForbidden(BitSet forbidden)

Deprecated.

Sets the forbidden attribute of the RNode object

Parameters:

forbidden - The new forbidden value

getRMap

public CDKRMap getRMap()

Deprecated.

Gets the rMap attribute of the RNode object

Returns:

The rMap value

getExtension

public BitSet getExtension()

Deprecated.

Gets the extension attribute of the RNode object

Returns:

The extension value

getForbidden

public BitSet getForbidden()

Deprecated.

Gets the forbidden attribute of the RNode object

Returns:

The forbidden value

toString

public String toString()

Deprecated.

Returns a string representation of the RNode

Overrides:

toString in class Object

Returns:

the string representation of the RNode

getrMap

public CDKRMap getrMap()

Deprecated.

Returns resolution Map

Returns:

the rMap

setrMap

public void setrMap(CDKRMap rMap)

Deprecated.

Sets resolution map/graph

Parameters:

rMap - the rMap to set