Uses of Class
org.openscience.cdk.graph.Cycles

Packages that use Cycles

Package	Description
org.openscience.cdk.graph

Uses of Cycles in org.openscience.cdk.graph

Methods in org.openscience.cdk.graph that return Cycles

Modifier and Type	Method and Description
static Cycles	Cycles.all(IAtomContainer container) Find all simple cycles in a molecule.
static Cycles	Cycles.all(IAtomContainer container, int length) All cycles of smaller than or equal to the specified length.
static Cycles	Cycles.edgeShort(IAtomContainer container) Find the edge short cycles of a molecule.
static Cycles	Cycles.essential(IAtomContainer container) Find the essential cycles of a molecule.
Cycles	CycleFinder.find(IAtomContainer molecule) Find the cycles of the provided molecule.
Cycles	CycleFinder.find(IAtomContainer molecule, int length) Find the cycles of the provided molecule.
Cycles	CycleFinder.find(IAtomContainer molecule, int[][] graph, int length) Find the cycles of the provided molecule when an adjacent relation (graph) is already available.
static Cycles	Cycles.mcb(IAtomContainer container) Find the minimum cycle basis (MCB) of a molecule.
static Cycles	Cycles.relevant(IAtomContainer container) Find the relevant cycles of a molecule.
static Cycles	Cycles.sssr(IAtomContainer container) Find the smallest set of smallest rings (SSSR) - aka minimum cycle basis (MCB) of a molecule.
static Cycles	Cycles.tripletShort(IAtomContainer container) Find the triplet short cycles of a molecule.
static Cycles	Cycles.vertexShort(IAtomContainer container) Find the vertex short cycles of a molecule.