org.openscience.cdk.smsd.algorithm.vflib.query

Class QueryCompiler

java.lang.Object

org.openscience.cdk.smsd.algorithm.vflib.query.QueryCompiler

All Implemented Interfaces:

IQueryCompiler

Deprecated.

SMSD has been deprecated from the CDK with a newer, more recent version of SMSD is available at http://github.com/asad/smsd.

@Deprecated
public class QueryCompiler
extends Object
implements IQueryCompiler

This class creates an template for MCS/substructure query.

Author:

Syed Asad Rahman <asad@ebi.ac.uk>

Source code:

master

Belongs to CDK module:

smsd

Constructor Summary

Constructors

Constructor and Description
QueryCompiler(IAtomContainer molecule, boolean shouldMatchBonds) Deprecated. Construct query object from the molecule
QueryCompiler(IQueryAtomContainer molecule) Deprecated. Construct query object from the molecule

Method Summary

Modifier and Type	Method and Description
IQuery	compile() Deprecated. Parse and build a query graph from the query moleucle.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

QueryCompiler

public QueryCompiler(IAtomContainer molecule,
                     boolean shouldMatchBonds)

Deprecated.

Construct query object from the molecule

Parameters:

molecule -

shouldMatchBonds -

QueryCompiler

public QueryCompiler(IQueryAtomContainer molecule)

Deprecated.

Construct query object from the molecule

Parameters:

molecule -

Method Detail

compile

public IQuery compile()

Deprecated.

Parse and build a query graph from the query moleucle.

Specified by:

compile in interface IQueryCompiler

Returns:

compile the query molecule and build the graph.