Package org.openscience.cdk.io.formats

Interface Summary

Interface	Description
IChemFormat	This class is the interface that all ChemFormat's should implement.
IChemFormatMatcher	This interface is used for classes that are able to match a certain chemical file format.
IResourceFormat	This class is the interface that all ResourceFormat's should implement.

Class Summary

Class	Description
ABINITFormat
AbstractResourceFormat	An abstract class providing AbstractResourceFormat.hashCode() and AbstractResourceFormat.equals(java.lang.Object) for IResourceFormats.
Aces2Format
ADFFormat
AlchemyFormat
BGFFormat
BSFormat	See here.
CacaoCartesianFormat	See here.
CacaoInternalFormat	See here.
CACheFormat
CDKOWLFormat	Serializes a CDK model into the Web Ontology Language using the N3 format.
CDKSourceCodeFormat
Chem3D_Cartesian_1Format
Chem3D_Cartesian_2Format
ChemDrawFormat
ChemtoolFormat	See here.
CIFFormat
CMLFormat	See here.
CMLRSSFormat
CRK2DFormat	See here.
CRK3DFormat	See here.
CrystClustFormat
CTXFormat
DaltonFormat
DMol3Format
DOCK5Format	See here.
FenskeHall_ZMatrixFormat
FingerprintFormat
GamessFormat	See here.
Gaussian03Format	See here.
Gaussian90Format
Gaussian92Format
Gaussian94Format
Gaussian95Format
Gaussian98Format
GaussianInputFormat	See here.
GhemicalMMFormat	See here.
GhemicalSPMFormat
GROMOS96Format	See here.
HINFormat	See here.
IChemFormatMatcher.MatchResult	Simple class holds whether a format matcher matched, when it matched and what the format was.
INChIFormat	See here.
INChIPlainTextFormat
JaguarFormat	See here.
JMEFormat
MacroModelFormat
MDLFormat	See here.
MDLRXNFormat	See here.
MDLRXNV2000Format	See here.
MDLRXNV3000Format	See here.
MDLV2000Format
MDLV3000Format
MMODFormat	See here.
Mol2Format	See here.
MOPAC2002Format
MOPAC2007Format
MOPAC2009Format
MOPAC2012Format
MOPAC7Format
MOPAC7InputFormat
MOPAC93Format
MOPAC97Format
MoSSOutputFormat
MPQCFormat	See here.
NWChemFormat	See here.
PCModelFormat	See here.
PDBFormat	See here.
PDBMLFormat	XML version of the PDB format.
PMPFormat
POVRayFormat	See here.
PQSChemFormat	See here.
PubChemASNFormat
PubChemCompoundsXMLFormat
PubChemCompoundXMLFormat
PubChemFormat	See here.
PubChemSubstancesASNFormat
PubChemSubstancesXMLFormat
PubChemSubstanceXMLFormat
QChemFormat	See here.
RawCopyFormat	See here.
RGroupQueryFormat	Format for Symyx RGfiles (Rgroup query files).
SDFFormat	See here.
ShelXFormat	See here.
SMARTSFormat	See here.
SMILESFIXFormat
SMILESFormat	See here.
SpartanFormat
SVGFormat
SybylDescriptorFormat	See here.
TinkerMM2Format	See here.
TinkerXYZFormat	See here.
TurboMoleFormat	See here.
UniChemXYZFormat
VASPFormat
ViewmolFormat	See here.
XEDFormat
XYZFormat
YasaraFormat	See here.
ZindoFormat	See here.
ZMatrixFormat