Package  Description 

org.openscience.cdk.aromaticity  
org.openscience.cdk.graph  
org.openscience.cdk.stereo 
Class and Description 

CycleFinder
Defines a method to find the cycles of a molecule.

Class and Description 

AtomContainerPermutor
The base class for permutors of atom containers, with a single abstract
method
containerFromPermutation that should be implemented in
concrete derived classes. 
CycleFinder
Defines a method to find the cycles of a molecule.

Cycles
A utility class for storing and computing the cycles of a chemical graph.

GraphUtil.EdgeToBondMap
Utility for storing
IBond s indexed by vertex end points. 
Matching
A matching is an independent edge set of a graph.

MinimumCycleBasis
Compute the minimum cycle basis (MCB) of a graph.

Permutor
General permutation generator, that uses orderly generation by ranking and
unranking.

ShortestPaths
Find and reconstruct the shortest paths from a given start atom to any other
connected atom.

Class and Description 

GraphUtil.EdgeToBondMap
Utility for storing
IBond s indexed by vertex end points. 
Copyright © 2021. All rights reserved.