org.openscience.cdk.smsd.helper

Class FinalMappings

java.lang.Object

org.openscience.cdk.smsd.helper.FinalMappings

All Implemented Interfaces:

IFinalMapping

Deprecated.

SMSD has been deprecated from the CDK with a newer, more recent version of SMSD is available at http://github.com/asad/smsd.

@Deprecated
public class FinalMappings
extends Object
implements IFinalMapping

Class that stores raw mapping(s) after each algorithm is executed.

Author:

Syed Asad Rahman <asad@ebi.ac.uk>

Source code:

master

Belongs to CDK module:

smsd

Constructor Summary

Constructors

Modifier	Constructor and Description
protected	FinalMappings() Deprecated.

Method Summary

Modifier and Type	Method and Description
void	add(Map<Integer,Integer> mapping) Deprecated. Adds mapping to the mapping list
void	clear() Deprecated. clear the mapping
List<Map<Integer,Integer>>	getFinalMapping() Deprecated. Returns the stored mappings
static FinalMappings	getInstance() Deprecated. Stores mapping solutions
Iterator<Map<Integer,Integer>>	getIterator() Deprecated. Returns a mapping Iterator
int	getSize() Deprecated. Returns number of stored mappings
void	set(List<Map<Integer,Integer>> list) Deprecated. Sets mapping list

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FinalMappings

protected FinalMappings()

Deprecated.

Method Detail

getInstance

public static FinalMappings getInstance()

Deprecated.

Stores mapping solutions

Returns:

instance of this object

add

public void add(Map<Integer,Integer> mapping)

Deprecated.

Adds mapping to the mapping list

Specified by:

add in interface IFinalMapping

Parameters:

mapping - List of all MCS mapping between a given reactant and product

set

public final void set(List<Map<Integer,Integer>> list)

Deprecated.

Sets mapping list

Specified by:

set in interface IFinalMapping

Parameters:

list - list of mappings

getIterator

public Iterator<Map<Integer,Integer>> getIterator()

Deprecated.

Returns a mapping Iterator

Specified by:

getIterator in interface IFinalMapping

Returns:

Iterator of mappings

clear

public void clear()

Deprecated.

clear the mapping

Specified by:

clear in interface IFinalMapping

getFinalMapping

public List<Map<Integer,Integer>> getFinalMapping()

Deprecated.

Returns the stored mappings

Specified by:

getFinalMapping in interface IFinalMapping

Returns:

get of MCS mapping List

getSize

public int getSize()

Deprecated.

Returns number of stored mappings

Specified by:

getSize in interface IFinalMapping

Returns:

size of the mapping