Modifier and Type | Class and Description |
---|---|
class |
CTFileQueryBond
Deprecated.
Use
Expr.Type.SINGLE_OR_AROMATIC etc. |
class |
OrderQueryBond
Deprecated.
|
class |
OrderQueryBondOrderOnly
Deprecated.
Use
new QueryBond(beg, end, ORDER, bord) |
class |
QueryBond
Implements the concept of a "query bond" between two or more atoms.
|
Modifier and Type | Method and Description |
---|---|
IQueryBond |
QueryBond.clone()
Clones this query bond object, including clones of the atoms between which the
query bond is defined.
|
Modifier and Type | Class and Description |
---|---|
class |
AnyOrderQueryBond
Deprecated.
|
class |
AromaticOrSingleQueryBond
Deprecated.
|
class |
AromaticQueryBond
Deprecated.
|
class |
LogicalOperatorBond
Deprecated.
|
class |
RingBond
Deprecated.
|
class |
SMARTSBond
Deprecated.
|
class |
StereoBond
Deprecated.
|
Modifier and Type | Method and Description |
---|---|
IQueryBond |
LogicalOperatorBond.getLeft()
Deprecated.
|
IQueryBond |
LogicalOperatorBond.getRight()
Deprecated.
|
IQueryBond |
RingIdentifierAtom.getRingBond()
Deprecated.
|
Modifier and Type | Method and Description |
---|---|
void |
LogicalOperatorBond.setLeft(IQueryBond left)
Deprecated.
|
void |
LogicalOperatorBond.setRight(IQueryBond right)
Deprecated.
|
void |
RingIdentifierAtom.setRingBond(IQueryBond bond)
Deprecated.
|
Modifier and Type | Class and Description |
---|---|
class |
PharmacophoreQueryAngleBond
Represents a pharmacophore query angle constraint.
|
class |
PharmacophoreQueryBond
Represents a pharmacophore query distance constraint.
|
Constructor and Description |
---|
DefaultBondMatcher(IQueryBond queryBond)
Deprecated.
Constructor
|
DefaultVFBondMatcher(IQueryBond queryBond)
Deprecated.
Constructor
|
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