Uses of Class
org.openscience.cdk.group.Partition

Packages that use Partition

Package	Description
org.openscience.cdk.group

Uses of Partition in org.openscience.cdk.group

Methods in org.openscience.cdk.group that return Partition

Modifier and Type	Method and Description
static Partition	Partition.fromString(String strForm) Parse a string like "[0,2|1,3]" to form the partition; cells are separated by '|' characters and elements within the cell by commas.
Partition	DiscretePartitionRefiner.getAutomorphismPartition() The automorphism partition is a partition of the elements of the group.
Partition	AtomContainerDiscretePartitionRefiner.getAutomorphismPartition(IAtomContainer atomContainer) Get the automorphism partition (equivalence classes) of the atoms.
Partition	Refinable.getInitialPartition() Get an initial partition of the vertices of the refinable - for example, by color.
Partition	Partition.splitAfter(int cellIndex, int splitElement) Splits this partition by taking the cell at cellIndex and making two new cells - the first with the the rest of the elements from that cell and the second with the singleton splitElement.
Partition	Partition.splitBefore(int cellIndex, int splitElement) Splits this partition by taking the cell at cellIndex and making two new cells - the first with the singleton splitElement and the second with the rest of the elements from that cell.
static Partition	Partition.unit(int size) Create a unit partition - in other words, the coarsest possible partition where all the elements are in one cell.

Methods in org.openscience.cdk.group with parameters of type Partition

Modifier and Type	Method and Description
PermutationGroup	AtomContainerDiscretePartitionRefiner.getAutomorphismGroup(IAtomContainer atomContainer, Partition initialPartition) Get the automorphism group of the molecule given an initial partition.
void	AtomContainerDiscretePartitionRefiner.refine(IAtomContainer atomContainer, Partition partition) Refine an atom partition based on the connectivity in the atom container.

Constructors in org.openscience.cdk.group with parameters of type Partition

Constructor and Description
Partition(Partition other) Copy constructor to make one partition from another.