Helper methods for fragmentation algorithms.
Most of these methods are specific to the fragmentation algorithms
in this package and so are protected. In general, these methods will
not be used by the rest of the API or by other users of the library.
Author: Rajarshi Guha
Belongs to CDK module: fragment
Methods inherited from class java.lang.
Object clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
List< IAtomContainer> splitMolecule( IAtomContainer atomContainer,
Non destructively split a molecule into two parts at the specified bond.
Note that if a ring bond is specified, the resultant list will contain
teh opened ring twice.
atomContainer - The molecule to split
bond - The bond to split at
Returns: A list containing the two parts of the molecule
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