Class AminoAcidManipulator
java.lang.Object
org.openscience.cdk.tools.manipulator.AminoAcidManipulator
Class with convenience methods that provide methods to manipulate
AminoAcid's.
- Author:
- Egon Willighagen
- Source code:
- main
- Belongs to CDK module:
- standard
- Created on:
- 2005-08-19
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionstatic void
addAcidicOxygen
(IAminoAcid acid) Adds the singly bonded oxygen from the acid group of the AminoAcid.static void
removeAcidicOxygen
(IAminoAcid acid) Removes the singly bonded oxygen from the acid group of the AminoAcid.
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Constructor Details
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AminoAcidManipulator
public AminoAcidManipulator()
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Method Details
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removeAcidicOxygen
Removes the singly bonded oxygen from the acid group of the AminoAcid.- Parameters:
acid
- AminoAcid from which to remove the oxygen- Throws:
CDKException
- when the C-terminus is not defined for the given AminoAcid
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addAcidicOxygen
Adds the singly bonded oxygen from the acid group of the AminoAcid.- Parameters:
acid
- AminoAcid to which to add the oxygen- Throws:
CDKException
- when the C-terminus is not defined for the given AminoAcid
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