- All Implemented Interfaces:
This mechanism adduct together two fragments. The second fragment will be deficient in charge.
It returns the reaction mechanism which has been cloned the
This reaction could be represented as A + [B+] => A-B
- Source code:
- Belongs to CDK module:
- Created on:
initiatepublic IReaction initiate
(IAtomContainerSet atomContainerSet, ArrayList<IAtom> atomList, ArrayList<IBond> bondList) throws CDKExceptionInitiates the process for the given mechanism. The atoms and bonds to apply are mapped between reactants and products.
- Specified by:
atomList- The list of atoms taking part in the mechanism. Only allowed two atoms.
bondList- The list of bonds taking part in the mechanism. not allowed bonds.
- The Reaction mechanism
CDKException- if an error occurs during the reaction process. See documentation for individual reaction processes