ReactionChain (cdk 2.10 API)

java.lang.Object
- org.openscience.cdk.ChemObject
- - org.openscience.cdk.ReactionSet
  - - org.openscience.cdk.reaction.ReactionChain

All Implemented Interfaces:

Serializable, Cloneable, ICDKObject, IChemObject, IChemObjectListener, IReactionSet
```
public class ReactionChain
extends ReactionSet
```
Classes that extends the definition of reaction to a chain reaction. This is designed to contains a set of reactions which are lineal linked as chain. That would mean no exist branches or cycles and in this concept you have a start reaction and final reaction. Each reaction is included in a step of the chain.

Author:

miguelrojasch <miguelrojasch@yahoo.es>

See Also:

Serialized Form

Source code:
main

Belongs to CDK module:
extra

Field Summary
- Fields inherited from interface org.openscience.cdk.interfaces.IChemObject
  ALIPHATIC, AROMATIC, CONJUGATED, HYDROGEN_BOND_ACCEPTOR, HYDROGEN_BOND_DONOR, IN_RING, MAPPED, NOT_IN_RING, PLACED, REACTIVE_CENTER, SINGLE_OR_DOUBLE, TYPEABLE, VISITED

Constructor Summary

Constructors
Constructor Description

ReactionChain()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`addReaction(IReaction reaction, int position)`	Added a IReaction for this chain in position.
`IReaction`	`getReaction(int position)`	Get the reaction of this chain reaction object at the position.
`int`	`getReactionStep(IReaction reaction)`	Get the position of the reaction into this chain reaction object.

Methods inherited from class org.openscience.cdk.ReactionSet
addReaction, clone, getReactionCount, isEmpty, reactions, removeAllReactions, removeReaction, removeReaction, stateChanged, toString

Methods inherited from class org.openscience.cdk.ChemObject
addListener, addProperties, clear, compare, flags, getBuilder, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, is, notifyChanged, notifyChanged, removeListener, removeProperty, set, setFlag, setFlags, setID, setNotification, setProperties, setProperty, shallowCopy

Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.openscience.cdk.interfaces.ICDKObject
getBuilder

Methods inherited from interface org.openscience.cdk.interfaces.IChemObject
addListener, addProperties, clear, flags, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, is, notifyChanged, notifyChanged, removeListener, removeProperty, set, setFlag, setFlags, setID, setNotification, setProperties, setProperty

- Constructor Detail
  - ReactionChain
```
public ReactionChain()
```
- Method Detail
  - addReaction
```
public void addReaction(IReaction reaction,
                        int position)
```
    Added a IReaction for this chain in position.
    
    Parameters:
    
    reaction - The IReaction
    
    position - The position in this chain where the reaction is to be inserted
  - getReactionStep
```
public int getReactionStep(IReaction reaction)
```
    Get the position of the reaction into this chain reaction object.
    
    Parameters:
    
    reaction - The IReaction to look at
    
    Returns:
    
    The position of the IReaction in this chain
  - getReaction
```
public IReaction getReaction(int position)
```
    Get the reaction of this chain reaction object at the position.
    
    Specified by:
    
    getReaction in interface IReactionSet
    
    Overrides:
    
    getReaction in class ReactionSet
    
    Parameters:
    
    position - The position of the IReaction in this chain to look for
    
    Returns:
    
    Reaction The IReaction to look at