Package org.openscience.cdk.io

Class CrystClustWriter

java.lang.Object

org.openscience.cdk.io.ChemObjectIO

org.openscience.cdk.io.DefaultChemObjectWriter

org.openscience.cdk.io.CrystClustWriter

All Implemented Interfaces:

Closeable, AutoCloseable, IChemObjectIO, IChemObjectWriter

public class CrystClustWriter
extends DefaultChemObjectWriter

Rather stupid file format used for storing crystal information.

Author:

Egon Willighagen

Source code:

main

Belongs to CDK module:

extra

Created on:

2004-01-01

Constructor Summary

Constructors

Constructor	Description
CrystClustWriter()
CrystClustWriter(OutputStream output)
CrystClustWriter(Writer out)	Constructs a new CrystClustWriter class.

Method Summary

Modifier and Type	Method	Description
boolean	accepts(Class<? extends IChemObject> classObject)	Returns whether the given IChemObject can be read or written.
void	close()	Flushes the output and closes this object.
IResourceFormat	getFormat()	Returns the IResourceFormat class for this IO class.
void	setWriter(OutputStream output)	Sets the OutputStream from which this ChemObjectWriter should write the contents.
void	setWriter(Writer out)	Sets the Writer from which this ChemObjectWriter should write the contents.
void	write(IChemObject object)	Serializes the IChemObject to CrystClust format and redirects it to the output Writer.

Methods inherited from class org.openscience.cdk.io.ChemObjectIO

addChemObjectIOListener, addSetting, addSettings, fireIOSettingQuestion, getIOSettings, getListeners, getSetting, getSetting, getSettings, hasSetting, removeChemObjectIOListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.openscience.cdk.io.IChemObjectIO

addChemObjectIOListener, addSetting, addSettings, getIOSettings, getListeners, getSetting, getSetting, getSettings, hasSetting, removeChemObjectIOListener

Constructor Detail

CrystClustWriter

public CrystClustWriter(Writer out)

Constructs a new CrystClustWriter class. Output will be stored in the Writer class given as parameter.

Parameters:

out - Writer to redirect the output to.

CrystClustWriter

public CrystClustWriter(OutputStream output)

CrystClustWriter

public CrystClustWriter()

Method Detail

getFormat

public IResourceFormat getFormat()

Description copied from interface: IChemObjectIO

Returns the IResourceFormat class for this IO class.

setWriter

public void setWriter(Writer out)
               throws CDKException

Description copied from interface: IChemObjectWriter

Sets the Writer from which this ChemObjectWriter should write the contents.

Throws:

CDKException

setWriter

public void setWriter(OutputStream output)
               throws CDKException

Description copied from interface: IChemObjectWriter

Sets the OutputStream from which this ChemObjectWriter should write the contents.

Throws:

CDKException

accepts

public boolean accepts(Class<? extends IChemObject> classObject)

Description copied from interface: IChemObjectIO

Returns whether the given IChemObject can be read or written.

Parameters:

classObject - IChemObject of which is tested if it can be handled.

Returns:

true, if the IChemObject can be handled.

write

public void write(IChemObject object)
           throws UnsupportedChemObjectException

Serializes the IChemObject to CrystClust format and redirects it to the output Writer.

Parameters:

object - A Molecule of MoleculeSet object

Throws:

UnsupportedChemObjectException

close

public void close()
           throws IOException

Flushes the output and closes this object.

Throws:

IOException - when the wrapper IO class cannot be closed.