Package org.openscience.cdk.config

Interface IAtomTypeConfigurator

All Known Implementing Classes:

CDKBasedAtomTypeConfigurator, OWLBasedAtomTypeConfigurator, TXTBasedAtomTypeConfigurator

public interface IAtomTypeConfigurator

Interface that allows reading atom type configuration data from some source.

Method Summary

Modifier and Type	Method	Description
List<IAtomType>	readAtomTypes(IChemObjectBuilder builder)	Reads a set of configured AtomType's into a List.
void	setInputStream(InputStream ins)	Sets the file containing the configuration data.

Method Details

setInputStream

void setInputStream(InputStream ins)

Sets the file containing the configuration data.

Parameters:

ins - InputStream from which the atom type definitions are to be read

readAtomTypes

List<IAtomType> readAtomTypes(IChemObjectBuilder builder)
                       throws IOException

Reads a set of configured AtomType's into a List.

Parameters:

builder - INewChemObjectBuilder used to instantiate the AtomType's.

Returns:

A List containing the AtomTypes extracted from the InputStream

Throws:

IOException - when something went wrong with reading the data