Package | Description |
---|---|
org.openscience.cdk.io | |
org.openscience.cdk.io.cml |
Modifier and Type | Method and Description |
---|---|
void |
CMLReader.registerConvention(String convention,
ICMLModule conv) |
Modifier and Type | Interface and Description |
---|---|
interface |
ICMLConvention
This interface describes the procedures classes must implement to be plugable
into the CMLHandler.
|
Modifier and Type | Class and Description |
---|---|
class |
CDKConvention
This is an implementation for the CDK convention.
|
class |
CMLCoreModule
Core CML 1.x and 2.x elements are parsed by this class (see (Willighagen, E.L.. Internet Journal of Chemistry. 2001. 4)).
|
class |
CMLReactionModule |
class |
JMOLANIMATIONConvention |
class |
MDLMolConvention
Implementation of the MDLMol Covention for CML.
|
class |
MDMoleculeConvention
Implements a Convention for parsing an MDMolecule from CML.
|
class |
PDBConvention
Implements the PDB convention used by PDB2CML.
|
class |
PMPConvention
Implementation of the PMPMol Covention for CML.
|
class |
QSARConvention
This is an implementation for the CDK convention.
|
Modifier and Type | Method and Description |
---|---|
ICMLModule |
CMLModuleStack.current()
Returns the last added entry.
|
ICMLModule |
CMLModuleStack.pop()
Retrieves and deletes to last added entry.
|
Modifier and Type | Method and Description |
---|---|
boolean |
CMLModuleStack.endsWith(ICMLModule lastElement)
Convenience method to check the last added elements.
|
boolean |
CMLModuleStack.endsWith(ICMLModule oneButLast,
ICMLModule lastElement)
Convenience method to check the last two added elements.
|
boolean |
CMLModuleStack.endsWith(ICMLModule twoButLast,
ICMLModule oneButLast,
ICMLModule lastElement)
Convenience method to check the last three added elements.
|
void |
CMLCoreModule.inherit(ICMLModule convention) |
void |
ICMLModule.inherit(ICMLModule conv) |
void |
CMLModuleStack.push(ICMLModule item)
Adds an entry to the stack.
|
void |
CMLHandler.registerConvention(String convention,
ICMLModule conv) |
Constructor and Description |
---|
CDKConvention(ICMLModule conv) |
CMLCoreModule(ICMLModule conv) |
CMLReactionModule(ICMLModule conv) |
JMOLANIMATIONConvention(ICMLModule conv) |
MDLMolConvention(ICMLModule conv) |
MDMoleculeConvention(ICMLModule conv) |
PDBConvention(ICMLModule conv) |
PMPConvention(ICMLModule conv) |
QSARConvention(ICMLModule conv) |
Copyright © 2021. All rights reserved.