org.openscience.cdk.layout

Class HydrogenPlacer

java.lang.Object

org.openscience.cdk.layout.HydrogenPlacer

public class HydrogenPlacer
extends Object

This is a wrapper class for some existing methods in AtomPlacer. It helps you to layout 2D and 3D coordinates for hydrogen atoms added to a molecule which already has coordinates for the rest of the atoms.

Author:

Christop Steinbeck

Created on:

2003-08-06

Field Summary

Fields

Modifier and Type	Field and Description
static boolean	debug
static boolean	debug1

Constructor Summary

Constructors

Constructor and Description
HydrogenPlacer()

Method Summary

Methods

Modifier and Type	Method and Description
void	placeHydrogens2D(IAtomContainer atomContainer, double bondLength)
void	placeHydrogens2D(IAtomContainer atomContainer, IAtom atom)
void	placeHydrogens2D(IAtomContainer atomContainer, IAtom atom, double bondLength)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

debug

public static final boolean debug

See Also:

Constant Field Values

debug1

public static final boolean debug1

See Also:

Constant Field Values

Constructor Detail

HydrogenPlacer

public HydrogenPlacer()

Method Detail

placeHydrogens2D

public void placeHydrogens2D(IAtomContainer atomContainer,
                    double bondLength)

placeHydrogens2D

public void placeHydrogens2D(IAtomContainer atomContainer,
                    IAtom atom)

placeHydrogens2D

public void placeHydrogens2D(IAtomContainer atomContainer,
                    IAtom atom,
                    double bondLength)