Modifier and Type | Class and Description |
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class |
AminoAcid
A AminoAcid is Monomer which stores additional amino acid specific
informations, like the N-terminus atom.
|
Modifier and Type | Method and Description |
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IAminoAcid |
AminoAcid.clone()
Clones this AminoAcid object.
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Modifier and Type | Class and Description |
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class |
DebugAminoAcid
Debugging data class.
|
Modifier and Type | Method and Description |
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IAminoAcid |
DebugAminoAcid.clone() |
Modifier and Type | Method and Description |
---|---|
IAminoAcid |
IAminoAcid.clone() |
Modifier and Type | Class and Description |
---|---|
class |
NNAminoAcid
Deprecated.
Use the
AminoAcid instead. |
Modifier and Type | Method and Description |
---|---|
IAminoAcid |
AminoAcid.clone()
Clones this AminoAcid object.
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Modifier and Type | Method and Description |
---|---|
static Map<String,IAminoAcid> |
AminoAcids.getHashMapBySingleCharCode()
Returns a HashMap where the key is one of G, A, V, L, I, S, T, C, M, D,
N, E, Q, R, K, H, F, Y, W and P.
|
Modifier and Type | Method and Description |
---|---|
static void |
AminoAcidManipulator.addAcidicOxygen(IAminoAcid acid)
Adds the singly bonded oxygen from the acid group of the AminoAcid.
|
static void |
AminoAcidManipulator.removeAcidicOxygen(IAminoAcid acid)
Removes the singly bonded oxygen from the acid group of the AminoAcid.
|