@Deprecated public class McgregorHelper extends Object
Modifier | Constructor and Description |
---|---|
protected |
McgregorHelper(boolean mappingCheckFlag,
int mappedAtomCount,
List<Integer> mappedAtomsOrg,
int neighborBondNumA,
int neighborBondNumB,
List<Integer> iBondNeighborAtomsA,
List<Integer> iBondNeighborAtomsB,
List<String> cBondNeighborsA,
List<String> cBondNeighborsB,
int setNumA,
int setNumB,
List<Integer> iBondSetA,
List<Integer> iBondSetB,
List<String> cBondSetA,
List<String> cBondSetB)
Deprecated.
Stores the variables
|
Modifier and Type | Method and Description |
---|---|
protected List<String> |
getcBondNeighborsA()
Deprecated.
|
protected List<String> |
getcBondNeighborsB()
Deprecated.
|
protected List<String> |
getCBondSetA()
Deprecated.
|
protected List<String> |
getCBondSetB()
Deprecated.
|
protected List<Integer> |
getiBondNeighborAtomsA()
Deprecated.
|
protected List<Integer> |
getiBondNeighborAtomsB()
Deprecated.
|
protected List<Integer> |
getIBondSetA()
Deprecated.
|
protected List<Integer> |
getIBondSetB()
Deprecated.
|
protected int |
getMappedAtomCount()
Deprecated.
|
protected List<Integer> |
getMappedAtomsOrg()
Deprecated.
|
protected int |
getNeighborBondNumA()
Deprecated.
|
protected int |
getNeighborBondNumB()
Deprecated.
|
protected int |
getSetNumA()
Deprecated.
|
protected boolean |
isMappingCheckFlag()
Deprecated.
|
protected McgregorHelper(boolean mappingCheckFlag, int mappedAtomCount, List<Integer> mappedAtomsOrg, int neighborBondNumA, int neighborBondNumB, List<Integer> iBondNeighborAtomsA, List<Integer> iBondNeighborAtomsB, List<String> cBondNeighborsA, List<String> cBondNeighborsB, int setNumA, int setNumB, List<Integer> iBondSetA, List<Integer> iBondSetB, List<String> cBondSetA, List<String> cBondSetB)
mappingCheckFlag
- mappedAtomCount
- mappedAtomsOrg
- neighborBondNumA
- neighborBondNumB
- iBondNeighborAtomsA
- iBondNeighborAtomsB
- cBondNeighborsA
- cBondNeighborsB
- setNumA
- setNumB
- iBondSetA
- iBondSetB
- cBondSetA
- cBondSetB
- protected boolean isMappingCheckFlag()
protected int getMappedAtomCount()
protected List<Integer> getMappedAtomsOrg()
protected int getNeighborBondNumA()
protected int getNeighborBondNumB()
protected List<Integer> getiBondNeighborAtomsA()
protected List<Integer> getiBondNeighborAtomsB()
protected List<String> getcBondNeighborsA()
protected List<String> getcBondNeighborsB()
protected int getSetNumA()
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