Uses of Class
org.openscience.cdk.iupac.parser.ParseException

Packages that use ParseException

Package	Description
org.openscience.cdk.iupac.parser

Uses of ParseException in org.openscience.cdk.iupac.parser

Methods in org.openscience.cdk.iupac.parser that return ParseException

Modifier and Type	Method and Description
ParseException	NomParser.generateParseException() Deprecated. Generate ParseException.

Methods in org.openscience.cdk.iupac.parser that throw ParseException

Modifier and Type	Method and Description
void	NomParser.allBaseNumbers() Deprecated. The usual numbers .
void	NomParser.attachLocationSpecified() Deprecated. An attach position has been specified using a comma seperated list followed by a dash
void	NomParser.bondType() Deprecated. Tokens which affect the bond order of the first bond.
protected IAtomContainer	MoleculeBuilder.buildMolecule(int mainChain, List<AttachedGroup> attachedSubstituents, List<AttachedGroup> attachedGroups, boolean isMainCyclic, String name) Start of the process of building a molecule from the parsed data.
void	NomParser.chainPrefix() Deprecated. A list of known tokens denoting a chain's length.
void	NomParser.completeChemicalName() Deprecated. The general form all chemical names must follow.
void	NomParser.connectingFunctionalGroupsConstruct() Deprecated. The layout of a functional group(s) which can connect anywhere.
void	NomParser.connectingFunctionalGroupSuffix() Deprecated. Functional groups suffixs for groups which can be connected anywhere along the main chain.
void	NomParser.cycle() Deprecated. Deals with cyclic main chains.
void	NomParser.dBlockMetals() Deprecated.
void	NomParser.endFunctionalGroups() Deprecated. Functional groups which occur at the end of the main chain and need a connecting "an".
void	NomParser.fBlockMetals() Deprecated.
void	NomParser.functionalGroupPrefix() Deprecated. The functional group part of the prefix
static IAtomContainer	NomParser.generate(String stringToParse) Deprecated. Parses the chemical name and returns the built molecule.
static IAtomContainer	NomParser.generate(String stringToParse, IChemObjectBuilder builder) Deprecated. Parses the chemical name and returns the built molecule.
void	NomParser.groupOneMetals() Deprecated.
void	NomParser.groupTwoMetals() Deprecated.
void	NomParser.mainChainConstruct() Deprecated. Main chains are compulsary and consist of an optional "cyclo", a length prefix and a posfix denoting functional groups.
void	NomParser.mainChainPrefix() Deprecated. Deal with the main chain's length.
void	NomParser.mainChainSuffix() Deprecated. Figure out the functional group by the main chain's suffix.
void	NomParser.oneAttachLocation() Deprecated. Only one attach location specified, should be followed by a dash.
void	NomParser.pBlockMetals() Deprecated.
void	NomParser.prefixConstruct() Deprecated. Allows 1 or more prefixes
void	NomParser.prefixFunctionalGroups() Deprecated.
void	NomParser.prefixType() Deprecated.
void	NomParser.prioritySubstituents() Deprecated. Things which have sub chains branching off them but the molecule has no main chain.
void	NomParser.prioritySubstituentsFunGroups() Deprecated. Things which have sub chains branching off them and the molecule does have a main chain.
void	NomParser.specialCase() Deprecated. Deal with special cases where the rules don't apply.
void	NomParser.subChain() Deprecated. The substituent part of the prefix
void	NomParser.tensNoUnits() Deprecated. Deal with fragments refering to the positioning of the base numbers (denoting their magnitude)
void	NomParser.tensWithUnits() Deprecated. Deals with numbers above 30 where the base numbers set appear twice.
void	NomParser.twoOrThreeAttachLocations() Deprecated. Two or three attach locations specidied, handle the second and if needed, the third one here.