AbstractMCSAlgorithm (cdk 2.9 API)

java.lang.Object
- org.openscience.cdk.smsd.interfaces.AbstractMCSAlgorithm

Direct Known Subclasses:

CDKMCSHandler, MCSPlusHandler, SingleMappingHandler, VFlibMCSHandler
```
@Deprecated
public abstract class AbstractMCSAlgorithm
extends Object
```
Deprecated.
SMSD has been deprecated from the CDK with a newer, more recent version of SMSD is available at http://github.com/asad/smsd.

Interface for MCS search algorithm.

Author:

Syed Asad Rahman <asad@ebi.ac.uk>

Source code:
main

Belongs to CDK module:
smsd

Constructor Summary

Constructors
Constructor Description

AbstractMCSAlgorithm()
Deprecated.

Method Summary

All Methods Instance Methods Abstract Methods Deprecated Methods
Modifier and Type	Method	Description
`abstract void`	`searchMCS(boolean shouldMatchBonds)`	Deprecated. Initialise the MCS search algorithm.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - AbstractMCSAlgorithm
```
public AbstractMCSAlgorithm()
```
    Deprecated.
- Method Detail
  - searchMCS
```
public abstract void searchMCS(boolean shouldMatchBonds)
```
    Deprecated.
    
    Initialise the MCS search algorithm. Each MCS algorithm should contain this method.
    
    Parameters:
    
    shouldMatchBonds - bond match