Class AbstractMCSAlgorithm

java.lang.Object
org.openscience.cdk.smsd.interfaces.AbstractMCSAlgorithm
Direct Known Subclasses:
CDKMCSHandler, MCSPlusHandler, SingleMappingHandler, VFlibMCSHandler

@Deprecated public abstract class AbstractMCSAlgorithm extends Object
Deprecated.
SMSD has been deprecated from the CDK with a newer, more recent version of SMSD is available at http://github.com/asad/smsd.
Interface for MCS search algorithm.
Author:
Syed Asad Rahman <asad@ebi.ac.uk>
Source code:
main
Belongs to CDK module:
smsd
  • Constructor Details

    • AbstractMCSAlgorithm

      public AbstractMCSAlgorithm()
      Deprecated.
  • Method Details

    • searchMCS

      public abstract void searchMCS(boolean shouldMatchBonds)
      Deprecated.
      Initialise the MCS search algorithm. Each MCS algorithm should contain this method.
      Parameters:
      shouldMatchBonds - bond match