TargetProperties (cdk 2.9 API)

java.lang.Object
- org.openscience.cdk.smsd.algorithm.vflib.builder.TargetProperties

All Implemented Interfaces:

Serializable
```
@Deprecated
public class TargetProperties
extends Object
implements Serializable
```
Deprecated.
SMSD has been deprecated from the CDK with a newer, more recent version of SMSD is available at http://github.com/asad/smsd.

Class for building/storing nodes (atoms) in the graph with atom query capabilities.

Author:

Syed Asad Rahman <asad@ebi.ac.uk>

See Also:

Serialized Form

Source code:
main

Belongs to CDK module:
smsd

Constructor Summary

Constructors
Constructor Description

TargetProperties(IAtomContainer container)
Deprecated.

Method Summary

All Methods Instance Methods Concrete Methods Deprecated Methods
Modifier and Type	Method	Description
`Integer`	`countNeighbors(IAtom atom)`	Deprecated.
`IAtom`	`getAtom(int j)`	Deprecated.
`int`	`getAtomCount()`	Deprecated.
`IBond`	`getBond(IAtom atom1, IAtom atom2)`	Deprecated.
`List<IAtom>`	`getNeighbors(IAtom atom)`	Deprecated.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - TargetProperties
```
public TargetProperties(IAtomContainer container)
```
    Deprecated.
    
    Parameters:
    
    container -
- Method Detail
  - countNeighbors
```
public Integer countNeighbors(IAtom atom)
```
    Deprecated.
    
    Parameters:
    
    atom -
    
    Returns:
    
    the connectedTargetAtomCountMap
  - getNeighbors
```
public List<IAtom> getNeighbors(IAtom atom)
```
    Deprecated.
    
    Parameters:
    
    atom -
    
    Returns:
    
    the connected Target Atom List
  - getBond
```
public IBond getBond(IAtom atom1,
                     IAtom atom2)
```
    Deprecated.
    
    Parameters:
    
    atom1 -
    
    atom2 -
    
    Returns:
    
    the map
  - getAtomCount
```
public int getAtomCount()
```
    Deprecated.
    
    Returns:
    
    atom count
  - getAtom
```
public IAtom getAtom(int j)
```
    Deprecated.