Package org.openscience.cdk.smsd.algorithm.rgraph

Class CDKRNode

java.lang.Object
org.openscience.cdk.smsd.algorithm.rgraph.CDKRNode
@Deprecated public class CDKRNode extends Object
Deprecated.
This class is part of SMSD and either duplicates functionality elsewhere in the CDK or provides public access to internal implementation details. SMSD has been deprecated from the CDK with a newer, more recent version of SMSD is available at http://github.com/asad/smsd.
Node of the resolution graphe (RGraph) An CDKRNode represents an association betwwen two edges of the source graphs G1 and G2 that are compared. Two edges may be associated if they have at least one common feature. The association is defined outside this class. The node keeps tracks of the ID of the mapped edges (in an CDKRMap), of its neighbours in the RGraph it belongs to and of the set of incompatible nodes (nodes that may not be along with this node in the same solution)
Author:
Stephane Werner from IXELIS mail@ixelis.net
Source code:
main
Belongs to CDK module:
smsd
Created on:
2002-07-17

  • Constructor Details

    • CDKRNode

      public CDKRNode(int id1, int id2)
      Deprecated.
      Constructor for the RNode object
      Parameters:
      id1 - number of the bond in the graphe 1
      id2 - number of the bond in the graphe 2

  • Method Details

    • setRMap

      public void setRMap(CDKRMap rMap)
      Deprecated.
      Sets the rMap attribute of the RNode object
      Parameters:
      rMap - The new rMap value

    • setExtension

      public void setExtension(BitSet extension)
      Deprecated.
      Sets the extension attribute of the RNode object
      Parameters:
      extension - The new extension value

    • setForbidden

      public void setForbidden(BitSet forbidden)
      Deprecated.
      Sets the forbidden attribute of the RNode object
      Parameters:
      forbidden - The new forbidden value

    • getRMap

      public CDKRMap getRMap()
      Deprecated.
      Gets the rMap attribute of the RNode object
      Returns:
      The rMap value

    • getExtension

      public BitSet getExtension()
      Deprecated.
      Gets the extension attribute of the RNode object
      Returns:
      The extension value

    • getForbidden

      public BitSet getForbidden()
      Deprecated.
      Gets the forbidden attribute of the RNode object
      Returns:
      The forbidden value

    • toString

      public String toString()
      Deprecated.
      Returns a string representation of the RNode
      Overrides:
      toString in class Object
      Returns:
      the string representation of the RNode

    • getrMap

      public CDKRMap getrMap()
      Deprecated.
      Returns resolution Map
      Returns:
      the rMap

    • setrMap

      public void setrMap(CDKRMap rMap)
      Deprecated.
      Sets resolution map/graph
      Parameters:
      rMap - the rMap to set