Uses of Class
org.openscience.cdk.pharmacophore.PharmacophoreQuery
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Packages that use PharmacophoreQuery Package Description org.openscience.cdk.pharmacophore -
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Uses of PharmacophoreQuery in org.openscience.cdk.pharmacophore
Methods in org.openscience.cdk.pharmacophore that return PharmacophoreQuery Modifier and Type Method Description PharmacophoreQuery
PharmacophoreMatcher. getPharmacophoreQuery()
Get the query pharmacophore.Methods in org.openscience.cdk.pharmacophore that return types with arguments of type PharmacophoreQuery Modifier and Type Method Description static List<PharmacophoreQuery>
PharmacophoreUtils. readPharmacophoreDefinitions(InputStream ins)
Read in a set of pharmacophore definitions to create pharmacophore queries.static List<PharmacophoreQuery>
PharmacophoreUtils. readPharmacophoreDefinitions(String filename)
Read in a set of pharmacophore definitions to create pharmacophore queries.Methods in org.openscience.cdk.pharmacophore with parameters of type PharmacophoreQuery Modifier and Type Method Description void
PharmacophoreMatcher. setPharmacophoreQuery(PharmacophoreQuery query)
Set a pharmacophore query.static void
PharmacophoreUtils. writePharmacophoreDefinition(PharmacophoreQuery[] queries, OutputStream out)
Write out one or more pharmacophore queries in the CDK XML format.static void
PharmacophoreUtils. writePharmacophoreDefinition(PharmacophoreQuery query, OutputStream out)
Write out one or more pharmacophore queries in the CDK XML format.Method parameters in org.openscience.cdk.pharmacophore with type arguments of type PharmacophoreQuery Modifier and Type Method Description static void
PharmacophoreUtils. writePharmacophoreDefinition(List<PharmacophoreQuery> queries, OutputStream out)
Write out one or more pharmacophore queries in the CDK XML format.Constructors in org.openscience.cdk.pharmacophore with parameters of type PharmacophoreQuery Constructor Description PharmacophoreMatcher(PharmacophoreQuery pharmacophoreQuery)
Initialize the matcher with a query.
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