Class StereoBond
- java.lang.Object
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- org.openscience.cdk.isomorphism.matchers.QueryChemObject
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- org.openscience.cdk.isomorphism.matchers.QueryBond
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- org.openscience.cdk.isomorphism.matchers.smarts.SMARTSBond
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- org.openscience.cdk.isomorphism.matchers.smarts.StereoBond
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- All Implemented Interfaces:
Cloneable
,IBond
,ICDKObject
,IChemObject
,IElectronContainer
,IQueryBond
@Deprecated public class StereoBond extends SMARTSBond
Deprecated.This query bond indicates a particular geometric stereo configuration.- Source code:
- main
- Belongs to CDK module:
- smarts
- Keywords:
- SMARTS
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Nested Class Summary
Nested Classes Modifier and Type Class Description static class
StereoBond.Direction
Deprecated.-
Nested classes/interfaces inherited from interface org.openscience.cdk.interfaces.IBond
IBond.Display, IBond.Order, IBond.Stereo
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Field Summary
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Fields inherited from class org.openscience.cdk.isomorphism.matchers.QueryBond
atomCount, atoms, electronCount, order, stereo
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Fields inherited from interface org.openscience.cdk.interfaces.IChemObject
ALIPHATIC, AROMATIC, CONJUGATED, HYDROGEN_BOND_ACCEPTOR, HYDROGEN_BOND_DONOR, IN_RING, MAPPED, NOT_IN_RING, PLACED, REACTIVE_CENTER, SINGLE_OR_DOUBLE, TYPEABLE, VISITED
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Constructor Summary
Constructors Constructor Description StereoBond(IChemObjectBuilder builder, StereoBond.Direction direction, boolean unspecified)
Deprecated.
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Method Summary
All Methods Instance Methods Concrete Methods Deprecated Methods Modifier and Type Method Description StereoBond.Direction
direction(IAtom atom)
Deprecated.boolean
matches(IBond bond)
Deprecated.Returns true of the givenbond
matches this IQueryBond.boolean
unspecified()
Deprecated.-
Methods inherited from class org.openscience.cdk.isomorphism.matchers.QueryBond
atoms, clone, compare, contains, equals, get2DCenter, get3DCenter, getAtom, getAtomCount, getBegin, getConnectedAtom, getConnectedAtoms, getContainer, getDisplay, getElectronCount, getEnd, getExpression, getIndex, getOrder, getOther, getStereo, hashCode, isAromatic, isConnectedTo, isInRing, setAtom, setAtoms, setDisplay, setElectronCount, setExpression, setIsAromatic, setIsInRing, setOrder, setStereo, toString
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Methods inherited from class org.openscience.cdk.isomorphism.matchers.QueryChemObject
addListener, addProperties, clear, flags, getBuilder, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, is, matches, notifyChanged, notifyChanged, removeListener, removeProperty, set, setFlag, setFlags, setID, setNotification, setProperties, setProperty
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Methods inherited from class java.lang.Object
finalize, getClass, notify, notifyAll, wait, wait, wait
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Methods inherited from interface org.openscience.cdk.interfaces.IBond
atoms, clone, compare, contains, get2DCenter, get3DCenter, getAtom, getAtomCount, getBegin, getConnectedAtom, getConnectedAtom, getConnectedAtoms, getContainer, getDisplay, getEnd, getIndex, getOrder, getOther, getStereo, isAromatic, isConnectedTo, isInRing, setAtom, setAtoms, setDisplay, setIsAromatic, setIsInRing, setOrder, setStereo
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Methods inherited from interface org.openscience.cdk.interfaces.ICDKObject
getBuilder
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Methods inherited from interface org.openscience.cdk.interfaces.IChemObject
addListener, addProperties, clear, flags, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, is, notifyChanged, notifyChanged, removeListener, removeProperty, set, setFlag, setFlags, setID, setNotification, setProperties, setProperty, toString
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Methods inherited from interface org.openscience.cdk.interfaces.IElectronContainer
getElectronCount, setElectronCount
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Constructor Detail
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StereoBond
public StereoBond(IChemObjectBuilder builder, StereoBond.Direction direction, boolean unspecified)
Deprecated.
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Method Detail
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matches
public boolean matches(IBond bond)
Deprecated.Description copied from class:QueryBond
Returns true of the givenbond
matches this IQueryBond.- Specified by:
matches
in interfaceIQueryBond
- Overrides:
matches
in classSMARTSBond
- Parameters:
bond
- IBond to match against- Returns:
- true, if this IQueryBond matches the given IBond
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unspecified
public boolean unspecified()
Deprecated.
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direction
public StereoBond.Direction direction(IAtom atom)
Deprecated.
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