Class OrderQueryBond

java.lang.Object

org.openscience.cdk.isomorphism.matchers.QueryChemObject

org.openscience.cdk.isomorphism.matchers.QueryBond

org.openscience.cdk.isomorphism.matchers.smarts.SMARTSBond

org.openscience.cdk.isomorphism.matchers.smarts.OrderQueryBond

All Implemented Interfaces:

Cloneable, IBond, ICDKObject, IChemObject, IElectronContainer, IQueryBond

@Deprecated
public class OrderQueryBond
extends SMARTSBond

Deprecated.

This matches a bond with a certain bond order. Daylight spec indicates that if match a single bond using '-', it should be an aliphatic single bond

Keywords:

SMARTS

Nested Class Summary

Nested classes/interfaces inherited from interface IBond

IBond.Display, IBond.Order, IBond.Stereo

Field Summary

Fields inherited from class QueryBond

atomCount, atoms, electronCount, order, stereo

Fields inherited from interface IChemObject

ALIPHATIC, AROMATIC, CONJUGATED, HYDROGEN_BOND_ACCEPTOR, HYDROGEN_BOND_DONOR, IN_RING, MAPPED, MARKUSH, NOT_IN_RING, PLACED, REACTIVE_CENTER, SINGLE_OR_DOUBLE, TYPEABLE, VISITED

Constructor Summary

Constructors

Constructor	Description
OrderQueryBond(IBond.Order order, IChemObjectBuilder builder)	Deprecated. Creates a new instance

Method Summary

Modifier and Type	Method	Description
boolean	matches(IBond bond)	Deprecated. Returns true of the given bond matches this IQueryBond.
String	toString()	Deprecated. Returns a one line string representation of this query bond.

Methods inherited from class QueryBond

atoms, clone, compare, contains, equals, get2DCenter, get3DCenter, getAtom, getAtomCount, getBegin, getConnectedAtom, getConnectedAtoms, getContainer, getDisplay, getElectronCount, getEnd, getExpression, getIndex, getOrder, getOther, getStereo, hashCode, isAromatic, isConnectedTo, isInRing, setAtom, setAtoms, setDisplay, setElectronCount, setExpression, setIsAromatic, setIsInRing, setOrder, setStereo

Methods inherited from class QueryChemObject

addListener, addProperties, clear, flags, getBuilder, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, is, matches, notifyChanged, notifyChanged, removeListener, removeProperty, set, setFlag, setFlags, setID, setNotification, setProperties, setProperty

Methods inherited from class Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface IBond

atoms, clone, compare, contains, get2DCenter, get3DCenter, getAtom, getAtomCount, getBegin, getConnectedAtom, getConnectedAtom, getConnectedAtoms, getContainer, getDisplay, getEnd, getIndex, getOrder, getOther, getStereo, isAromatic, isConnectedTo, isInRing, setAtom, setAtoms, setDisplay, setIsAromatic, setIsInRing, setOrder, setStereo

Methods inherited from interface ICDKObject

getBuilder

Methods inherited from interface IChemObject

addListener, addProperties, clear, flags, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, is, notifyChanged, notifyChanged, removeListener, removeProperty, set, setFlag, setFlags, setID, setNotification, setProperties, setProperty

Methods inherited from interface IElectronContainer

getElectronCount, setElectronCount

Constructor Details

OrderQueryBond

public OrderQueryBond(IBond.Order order,
 IChemObjectBuilder builder)

Deprecated.

Creates a new instance

Parameters:

order - the order of bond

Method Details

matches

public boolean matches(IBond bond)

Deprecated.

Description copied from class: QueryBond

Returns true of the given bond matches this IQueryBond.

Specified by:

matches in interface IQueryBond

Overrides:

matches in class SMARTSBond

Parameters:

bond - IBond to match against

Returns:

true, if this IQueryBond matches the given IBond

toString

public String toString()

Deprecated.

Description copied from class: QueryBond

Returns a one line string representation of this query bond.

Specified by:

toString in interface IChemObject

Overrides:

toString in class QueryBond

Returns:

The string representation of this query bond