Package org.openscience.cdk.io.cml

Class QSARConvention

java.lang.Object

org.openscience.cdk.io.cml.CMLCoreModule

org.openscience.cdk.io.cml.QSARConvention

All Implemented Interfaces:

ICMLModule

public class QSARConvention
extends CMLCoreModule

This is an implementation for the CDK convention.

Author:

egonw

Source code:

main

Belongs to CDK module:

io

Field Summary

Fields inherited from class org.openscience.cdk.io.cml.CMLCoreModule

atomAromaticities, atomCounter, atomCustomProperty, atomDictRefs, atomEnumeration, atomicNumbers, atomParities, bondARef1, bondARef2, bondAromaticity, bondCounter, bondCustomProperty, bondDictRefs, bondElid, bondid, bondStereo, BUILTIN, crystalScalar, curRef, currentAtom, currentBond, currentChars, currentChemFile, currentChemModel, currentChemSequence, CurrentElement, currentMolecule, currentMoleculeSet, currentMonomer, currentReaction, currentReactionSet, currentStrand, DICTREF, elementTitle, elid, elsym, eltitles, exactMasses, formalCharges, formula, formulaCounter, hCounts, inchi, isotope, logger, moleculeCustomProperty, occupancies, order, parityARef1, parityARef2, parityARef3, parityARef4, parityAtomsGiven, parityGiven, partialCharges, spinMultiplicities, stereoGiven, SYSTEMID, unitcellparams, x2, x3, xfract, y2, y3, yfract, z3, zfract

Constructor Summary

Constructors

Constructor	Description
QSARConvention(IChemFile chemFile)
QSARConvention(ICMLModule conv)

Method Summary

Modifier and Type	Method	Description
void	endElement(org.openscience.cdk.io.cml.CMLStack xpath, String uri, String local, String raw)
void	startElement(org.openscience.cdk.io.cml.CMLStack xpath, String uri, String local, String raw, Attributes atts)

Methods inherited from class org.openscience.cdk.io.cml.CMLCoreModule

addArrayElementsTo, characterData, endDocument, inherit, newAtomData, newBondData, newCrystalData, newFormulaData, newMolecule, newMoleculeData, notify, returnChemFile, startDocument, storeAtomData, storeBondData, storeData

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

QSARConvention

public QSARConvention(IChemFile chemFile)

QSARConvention

public QSARConvention(ICMLModule conv)

Method Detail

startElement

public void startElement(org.openscience.cdk.io.cml.CMLStack xpath,
                         String uri,
                         String local,
                         String raw,
                         Attributes atts)

Specified by:

startElement in interface ICMLModule

Overrides:

startElement in class CMLCoreModule

endElement

public void endElement(org.openscience.cdk.io.cml.CMLStack xpath,
                       String uri,
                       String local,
                       String raw)

Specified by:

endElement in interface ICMLModule

Overrides:

endElement in class CMLCoreModule