Uses of Class
org.openscience.cdk.graph.GraphUtil.EdgeToBondMap
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Packages that use GraphUtil.EdgeToBondMap Package Description org.openscience.cdk.graph org.openscience.cdk.stereo -
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Uses of GraphUtil.EdgeToBondMap in org.openscience.cdk.graph
Methods in org.openscience.cdk.graph that return GraphUtil.EdgeToBondMap Modifier and Type Method Description static GraphUtil.EdgeToBondMap
GraphUtil.EdgeToBondMap. withSpaceFor(IAtomContainer container)
Create a map with enough space for all the bonds in the molecule,container
.Methods in org.openscience.cdk.graph with parameters of type GraphUtil.EdgeToBondMap Modifier and Type Method Description static int
Cycles. markRingAtomsAndBonds(IAtomContainer mol, int[][] adjList, GraphUtil.EdgeToBondMap bondMap)
Find and mark all cyclic atoms and bonds in the provided molecule.static int[][]
GraphUtil. toAdjList(IAtomContainer container, GraphUtil.EdgeToBondMap bondMap)
Create an adjacent list representation of thecontainer
and fill in thebondMap
for quick lookup. -
Uses of GraphUtil.EdgeToBondMap in org.openscience.cdk.stereo
Fields in org.openscience.cdk.stereo declared as GraphUtil.EdgeToBondMap Modifier and Type Field Description protected GraphUtil.EdgeToBondMap
StereoElementFactory. bondMap
A bond map for fast access to bond labels between two atom indices.Constructors in org.openscience.cdk.stereo with parameters of type GraphUtil.EdgeToBondMap Constructor Description StereoElementFactory(IAtomContainer container, int[][] graph, GraphUtil.EdgeToBondMap bondMap)
Internal constructor.
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