Uses of Class
org.openscience.cdk.geometry.cip.VisitedAtoms
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Packages that use VisitedAtoms Package Description org.openscience.cdk.geometry.cip -
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Uses of VisitedAtoms in org.openscience.cdk.geometry.cip
Methods in org.openscience.cdk.geometry.cip that return VisitedAtoms Modifier and Type Method Description VisitedAtoms
ILigand. getVisitedAtoms()
Returns a list of visitedAtoms.VisitedAtoms
Ligand. getVisitedAtoms()
Returns a list of visitedAtoms.Methods in org.openscience.cdk.geometry.cip with parameters of type VisitedAtoms Modifier and Type Method Description static ILigand
CIPTool. defineLigand(IAtomContainer container, VisitedAtoms visitedAtoms, int chiralAtom, int ligandAtom)
Creates a ligand attached to a single chiral atom, where the involved atoms are identified by there index in theIAtomContainer
.void
VisitedAtoms. visited(VisitedAtoms visitedAtoms)
Adds all atoms from thevisitedAtoms
list to the current list.Constructors in org.openscience.cdk.geometry.cip with parameters of type VisitedAtoms Constructor Description ImplicitHydrogenLigand(IAtomContainer container, VisitedAtoms visitedAtoms, IAtom centralAtom)
Ligand(IAtomContainer container, VisitedAtoms visitedAtoms, IAtom centralAtom, IAtom ligandAtom)
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