Uses of Interface org.openscience.cdk.fingerprint.ICountFingerprint (cdk 2.10 API)

Packages that use ICountFingerprint
Package Description

org.openscience.cdk.fingerprint

org.openscience.cdk.similarity

Uses of ICountFingerprint in org.openscience.cdk.fingerprint

Classes in org.openscience.cdk.fingerprint that implement ICountFingerprint
Modifier and Type	Class	Description
`class`	`IntArrayCountFingerprint`

Methods in org.openscience.cdk.fingerprint that return ICountFingerprint
Modifier and Type	Method	Description
`ICountFingerprint`	AtomPairs2DFingerprinter.`getCountFingerprint(IAtomContainer mol)`
`ICountFingerprint`	CircularFingerprinter.`getCountFingerprint(IAtomContainer mol)`	Calculates the circular fingerprint for the given `IAtomContainer`, and returns a datastructure that enumerates all of the fingerprints, and their counts (i.e.
`ICountFingerprint`	EStateFingerprinter.`getCountFingerprint(IAtomContainer container)`	Returns the count fingerprint for the given `IAtomContainer`.
`ICountFingerprint`	ExtendedFingerprinter.`getCountFingerprint(IAtomContainer container)`	Returns the count fingerprint for the given `IAtomContainer`.
`ICountFingerprint`	Fingerprinter.`getCountFingerprint(IAtomContainer container)`
`ICountFingerprint`	IFingerprinter.`getCountFingerprint(IAtomContainer container)`	Returns the count fingerprint for the given `IAtomContainer`.
`ICountFingerprint`	LingoFingerprinter.`getCountFingerprint(IAtomContainer container)`
`ICountFingerprint`	MACCSFingerprinter.`getCountFingerprint(IAtomContainer container)`	Returns the count fingerprint for the given `IAtomContainer`.
`ICountFingerprint`	PubchemFingerprinter.`getCountFingerprint(IAtomContainer container)`	Returns the count fingerprint for the given `IAtomContainer`.
`ICountFingerprint`	ShortestPathFingerprinter.`getCountFingerprint(IAtomContainer iac)`
`ICountFingerprint`	SignatureFingerprinter.`getCountFingerprint(IAtomContainer container)`
`ICountFingerprint`	SubstructureFingerprinter.`getCountFingerprint(IAtomContainer atomContainer)`	Returns the count fingerprint for the given `IAtomContainer`.
`static ICountFingerprint`	FingerprinterTool.`makeCountFingerprint(Map<String,Integer> features)`	Wrap a mapping of features and their counts to a continuous (count based) fingerprint.

Methods in org.openscience.cdk.fingerprint with parameters of type ICountFingerprint
Modifier and Type	Method	Description
`void`	ICountFingerprint.`merge(ICountFingerprint fp)`	Merge all from `fp` into the current fingerprint.
`void`	IntArrayCountFingerprint.`merge(ICountFingerprint fp)`

Uses of ICountFingerprint in org.openscience.cdk.similarity

Methods in org.openscience.cdk.similarity with parameters of type ICountFingerprint
Modifier and Type	Method	Description
`static double`	Tanimoto.`calculate(ICountFingerprint fp1, ICountFingerprint fp2)`	Evaluate continuous Tanimoto coefficient for two feature, count fingerprint representations.
`static double`	Tanimoto.`method1(ICountFingerprint fp1, ICountFingerprint fp2)`	Calculates Tanimoto distance for two count fingerprints using method 1.
`static double`	Tanimoto.`method2(ICountFingerprint fp1, ICountFingerprint fp2)`	Calculates Tanimoto distance for two count fingerprints using method 2 [J.A. Grant, J.A. Haigh, B.T. Pickup, A. Nicholls and R.A. Sayle. J. Chem. Inf. Model.. 2006. 46].