org.openscience.cdk.renderer.generators.standard

Class SelectionVisibility

java.lang.Object

org.openscience.cdk.renderer.SymbolVisibility

org.openscience.cdk.renderer.generators.standard.SelectionVisibility

public final class SelectionVisibility
extends SymbolVisibility

Extended existing symbol visibility options to account for selection of atoms in the standard generator. The selection viability displays an atom symbol regardless as to whether it is normally 'shown'. By default, the symbol is shown if the atom is selected an not next to any selected bonds (disconnected). Alternatively, all select atoms can be displayed. An atom or bond is selected if the StandardGenerator.HIGHLIGHT_COLOR is non-null.

Author:

John May

Method Summary

Methods

Modifier and Type	Method and Description
static SymbolVisibility	all(SymbolVisibility visibility) Display the atom symbol if is selected, otherwise use the provided visibility.
static SymbolVisibility	disconnected(SymbolVisibility visibility) Display the atom symbol if is disconnected from any other selected atoms or bonds.
boolean	visible(IAtom atom, List<IBond> neighbors, RendererModel model) Determine if an atom with the specified bonds is visible.

Methods inherited from class org.openscience.cdk.renderer.SymbolVisibility

all, iupacRecommendations, iupacRecommendationsWithoutTerminalCarbon

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

disconnected

public static SymbolVisibility disconnected(SymbolVisibility visibility)

Display the atom symbol if is disconnected from any other selected atoms or bonds. The provided visibility is used when the atom is not selected.

Parameters:

visibility - visibility when not selected

Returns:

visibility instance

all

public static SymbolVisibility all(SymbolVisibility visibility)

Display the atom symbol if is selected, otherwise use the provided visibility.

Parameters:

visibility - visibility when not selected

Returns:

visibility instance

visible

public boolean visible(IAtom atom,
              List<IBond> neighbors,
              RendererModel model)

Determine if an atom with the specified bonds is visible.

Specified by:

visible in class SymbolVisibility

Parameters:

atom - an atom

neighbors - neighboring bonds

Returns:

whether the atom symbol is visible