org.openscience.cdk.ringsearch.cyclebasis

Class SimpleCycleBasis

java.lang.Object

org.openscience.cdk.ringsearch.cyclebasis.SimpleCycleBasis

public class SimpleCycleBasis
extends Object

Auxiliary class for CycleBasis.

Author:

Ulrich Bauer

Required library to be able to run this class:

jgrapht-0.5.3.jar

Required library to be able to compile this class:

jgrapht-0.5.3.jar

Constructor Summary

Constructors

Constructor and Description
SimpleCycleBasis(List<SimpleCycle> cycles, List edgeList, org._3pq.jgrapht.UndirectedGraph graph)
SimpleCycleBasis(org._3pq.jgrapht.UndirectedGraph graph)

Method Summary

Methods

Modifier and Type	Method and Description
List	cycles()
List	edges()
List	equivalenceClasses()
Collection	essentialCycles()
void	printIncidenceMatrix()
Map	relevantCycles()
int[]	weightVector()

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SimpleCycleBasis

public SimpleCycleBasis(List<SimpleCycle> cycles,
                List edgeList,
                org._3pq.jgrapht.UndirectedGraph graph)

SimpleCycleBasis

public SimpleCycleBasis(org._3pq.jgrapht.UndirectedGraph graph)

Method Detail

weightVector

public int[] weightVector()

edges

public List edges()

cycles

public List cycles()

essentialCycles

public Collection essentialCycles()

relevantCycles

public Map relevantCycles()

equivalenceClasses

public List equivalenceClasses()

printIncidenceMatrix

public void printIncidenceMatrix()