@TestClass(value="org.openscience.cdk.io.Mol2ReaderTest") public class Mol2Reader extends DefaultChemObjectReader
IChemObjectReader.Mode
Constructor and Description |
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Mol2Reader() |
Mol2Reader(InputStream input) |
Mol2Reader(Reader in)
Constructs a new MDLReader that can read Molecule from a given Reader.
|
Modifier and Type | Method and Description |
---|---|
boolean |
accepts(Class classObject)
Returns whether the given
IChemObject can be read or written. |
boolean |
accepts(IChemObject object) |
void |
close()
Closes this IChemObjectIO's resources.
|
IResourceFormat |
getFormat()
Returns the
IResourceFormat class for this IO class. |
<T extends IChemObject> |
read(T object)
Reads an IChemObject of type "object" from input.
|
void |
setReader(InputStream input)
Sets the InputStream from which this ChemObjectReader should read
the contents.
|
void |
setReader(Reader input)
Sets the Reader from which this ChemObjectReader should read
the contents.
|
addChemObjectIOListener, getIOSettings, handleError, handleError, handleError, handleError, removeChemObjectIOListener, setErrorHandler, setReaderMode
public Mol2Reader(Reader in)
in
- The Reader to read frompublic Mol2Reader(InputStream input)
public Mol2Reader()
@TestMethod(value="testGetFormat") public IResourceFormat getFormat()
IChemObjectIO
IResourceFormat
class for this IO class.@TestMethod(value="testSetReader_Reader") public void setReader(Reader input) throws CDKException
IChemObjectReader
CDKException
@TestMethod(value="testSetReader_InputStream") public void setReader(InputStream input) throws CDKException
IChemObjectReader
CDKException
@TestMethod(value="testAccepts") public boolean accepts(Class classObject)
IChemObjectIO
IChemObject
can be read or written.classObject
- IChemObject
of which is tested if it can be handled.IChemObject
can be handled.public <T extends IChemObject> T read(T object) throws CDKException
ISimpleChemObjectReader
object
- the type of object to returnCDKException
- it is thrown if
the type of information is not available from
the input@TestMethod(value="testAccepts") public boolean accepts(IChemObject object)
@TestMethod(value="testClose") public void close() throws IOException
IChemObjectIO
IOException